Author

Jason Hipp

Harvard University

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1 Biophysics· 1

Signature Assays, Organisms & Methods

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Organism:human· 2 Assay:imaging· 2 Research Focus:benchmarking· 1 Research Focus:cell type annotation· 1 Research Focus:clustering· 1 Approach:contrastive learning· 1 Approach:deep learning· 1 Approach:machine learning (classical)· 1

Frequent Co-Authors

Adrian Vasile DalcaiD· 1 shared Albert Eusik KimiD· 1 shared Anil V. ParwaniiD· 1 shared Anthony John IafrateiD· 1 shared Balaji SelvarajiD· 1 shared Bruce Robert RoseniD· 1 shared Carmen M. PerrinoiD· 1 shared Christopher P. BridgeiD· 1 shared

Activity by Year

2021-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 36 mutual co-author links

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1 shared paperBiophysics

Adrian Vasile DalcaORCID

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Author profile →

2 papers

Recent·Most cited

Deep learning localizes focal biology implicated in therapeutic resistance within routine histology

Tiago Goncalves, Dagoberto Pulido-Arias, Carmen M. Perrino, Thanpisit Lomphithak, Mason C. Cleveland, Adrian Vasile Dalca, Elizabeth Robins Gerstner, Jason Hipp, Jay Patel, Bruce Robert Rosen, Sahussapont Joseph Sirintrapun, Seth Andrew Wander, Anil V. Parwani, Gary H. Tozbikian, Muhammad Khalid Khan Niazi, , Albert Eusik Kim

Weakly supervised deep learning localizes focal tissue regions enriched for therapeutically relevant biology in routine histology, offering a scalable strategy to study therapeutic resistance across large patient populations.

bioRxiv · Aug 20, 2026 · PreprintBiophysics

Image model embeddings for digital pathology and drug development via self-supervised learning

Khan Baykaner, Mona Xu, Lucas Bordeaux, Feng Gu, Balaji Selvaraj, Isabelle Gaffney, Laura A. L. Dillon, Jason Hipp

This paper introduces DIME, a self-supervised learning pipeline for training image patch embeddings from whole slide images, enabling effective downstream tasks with limited data.

bioRxiv · Sep 20, 2021 · PreprintBioinformatics