Author

Jenny Yang

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 1 Assay:metagenomics· 1 Approach:transformer / foundation model· 1

Frequent Co-Authors

Neythen J. TreloariD· 1 shared Saif Ur-Rehman· 1 shared

Activity by Year

2026-2026 · peak 1/yr

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2 top collaborators · 1 mutual co-author link

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1 shared paperBioinformatics

Neythen J. TreloarORCID

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1 paper

Recent·Most cited

Learning the Language of the Microbiome with Transformers

Neythen J. Treloar, Saif Ur-Rehman, Jenny Yang

The paper introduces Atlas, a microbiome dataset, and Waypoint, a series of transformer-based models, showing improvements in downstream tasks through pretraining.

bioRxiv · Sep 10, 2026 · PreprintBioinformatics