Author

John C. Stansfield

Virginia Commonwealth University

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Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Assay:Hi-C· 2 Approach:statistical model· 2 Research Focus:benchmarking· 1 Research Focus:clustering· 1 Research Focus:differential expression· 1 Research Focus:dimensionality reduction· 1 Organism:human· 1

Frequent Co-Authors

Kellen G. CresswelliD· 2 shared Mikhail G. DozmoroviD· 2 shared Vladimir I. VladimiroviD· 1 shared

Activity by Year

2018-2020 · peak 1/yr

Co-Author Collaboration Network

3 top collaborators · 3 mutual co-author links

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2 shared papersBioinformatics

Kellen G. CresswellORCID

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2 papers

Recent·Most cited

SpectralTAD: an R package for defining a hierarchy of Topologically Associated Domains using spectral clustering

Kellen G. Cresswell, John C. Stansfield, Mikhail G. Dozmorov

SpectralTAD detects hierarchical TAD structures from Hi-C data, outperforming existing tools and showing biological relevance of shared TAD boundaries.

BMC Bioinformatics · Jul 20, 2020Peer-reviewedBioinformatics

HiCcompare: a method for joint normalization of Hi-C datasets and differential chromatin interaction detection

John C. Stansfield, Kellen G. Cresswell, Vladimir I. Vladimirov, Mikhail G. Dozmorov

HiCcompare normalizes multiple Hi-C datasets and detects differential chromatin interactions, outperforming single-dataset normalization methods in identifying true interaction changes.

BMC Bioinformatics · Jul 31, 2018Peer-reviewedBioinformatics