MUDflow: Combining Neural Networks, UMAP and DBM Clustering to Identify Cell Populations Accurately, Quickly and Easily in Mass and Fluorescence Cytometry
Connor Meehan, Stephen Meehan, Jonathan Ebrahimian, Wayne Moore, David R. Parks, Guenther Walther, Leonore A. Herzenberg
The paper introduces MLPgater, a neural network for automatic flow cytometry gating, and MUDflow, which combines it with UMAP and DBM clustering to improve population detection accuracy and speed.
bioRxiv · Jun 19, 2025 · PreprintBioinformatics