Buffering Updates Enables Efficient Dynamic de Bruijn Graphs
Jarno Alanko, Bahar Alipanahi, Jonathen Settle, Christina A. Boucher, Travis Gagie
The paper introduces BufBOSS, a compressed dynamic de Bruijn graph that improves update efficiency by buffering changes, outperforming existing tools in time, memory, and deletion speed.
Computational and Structural Biotechnology Journal · Jan 1, 2021Peer-reviewedBioinformatics