Population size history from short genomic scaffolds: how short is too short?
Graham Gower, Jono Tuke, Adam B. Rohrlach, Julien Soubrier, Bastien Llamas, Nigel Geoffrey Bean, Alan Cooper
This study evaluates the performance of PSMC and PSMC' on short genomic scaffolds and finds that psmc remains accurate down to 100 kb while msmc is only reliable for scaffolds over 1 Mb.
bioRxiv · Aug 3, 2018 · PreprintGenetics