TAFFISH: shell-native command-level reproducibility for bioinformatics
Kaiyuan Han, Ting Wang, Shi-Shi Yuan, Cai-Yi Ma, Wei Su, Xiaolong Li, Kejun Deng, Hao Lin
TAFFISH provides a reproducibility framework for bioinformatics by packaging shell commands as executable units with versioning and validation.
bioRxiv · Sep 15, 2025 · PreprintBioinformatics