Author

Koichi Ohkubo

Kyoto University

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1

Signature Assays, Organisms & Methods

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Research Focus:database / resource· 1 Research Focus:gene regulatory network inference· 1 Assay:protein sequence· 1 Research Focus:software / tool· 1 Approach:statistical model· 1

Frequent Co-Authors

Hiroyuki OgataiD· 1 shared Hisashi EndoiD· 1 shared Minoru I. KanehisaiD· 1 shared Romain Blanc‐MathieuiD· 1 shared Susumu GotoiD· 1 shared Takuya Aramaki· 1 shared

Activity by Year

2019-2019 · peak 1/yr

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6 top collaborators · 15 mutual co-author links

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1 shared paperBioinformatics

Hiroyuki OgataORCID

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1 paper

Recent·Most cited

KofamKOALA: KEGG ortholog assignment based on profile HMM and adaptive score threshold

Takuya Aramaki, Romain Blanc‐Mathieu, Hisashi Endo, Koichi Ohkubo, Minoru I. Kanehisa, Susumu Goto, Hiroyuki Ogata

KofamKOALA assigns KEGG Orthologs to protein sequences using profile HMMs and adaptive thresholds, achieving comparable accuracy to existing tools while being faster.

Bioinformatics · Nov 18, 2019Peer-reviewedBioinformatics