Recombination smooths the time-signal disrupted by latency in within-host HIV phylogenies
L. A. Castro, T. Leitner, E. Romero-Severson
This paper develops a coalescent-based simulator of within-host HIV evolution that includes latency and recombination, showing how recombination recovers disrupted temporal signals caused by latency in phylogenetic trees.
bioRxiv · Feb 22, 2022Evolutionary Biology