scAmp analyzes focal gene amplifications at single-cell resolution
Matthew G. Jones, Natasha E. Weiser, King L. Hung, Xiaowei Yan, Sangya Agarwal, Jens Luebeck, Aditi Gnanasekar, Brooke E. Howitt, Ellis J. Curtis, Kevin Yu, John C. Rose, Katerina Kraft, Valeh Valiollah Pour Amiri, Leena Satpathy, Vineet Bafna, , Howard Y. Chang
scAmp detects and analyzes ecDNA at single-cell resolution, showing its impact on chromatin accessibility in cancer cells.
bioRxiv · Feb 15, 2026 · PreprintCancer Biology