Efficient Identification of Short Tandem Repeats via Context-Aware Motif Discovery and Ultra-Fast Sequence Alignment
Xingyu Liao, Long Wen, Minghui Jing, Xingyi Li, Bolin Chen, Bin Zhang, Xin Gao, Xuequn Shang
FastSTR efficiently identifies and characterizes tandem repeats across 13 species with high accuracy and speed, uncovering new genomic elements and disease-related variations.
bioRxiv · Nov 25, 2025 · PreprintBioinformatics