Author

M. Boden

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Cancer Biology· 1 Cell Biology· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 2 Approach:deep learning· 2 Research Focus:gene regulatory network inference· 2 Organism:human· 2 Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Research Focus:differential expression· 1 Assay:DNA methylation· 1

Frequent Co-Authors

B. Balderson· 2 shared A. N. Mora· 1 shared A. Smith· 1 shared B. Vitrinel· 1 shared C. Boix· 1 shared C. Frezza· 1 shared C. Schmidt· 1 shared E. Sinniah· 1 shared

Activity by Year

2020-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 27 mutual co-author links

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2 shared papersCancer Biology

B. Balderson

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2 papers

Recent·Most cited

SiRCle (Signature Regulatory Clustering) model integration reveals mechanisms of phenotype regulation in renal cancer

A. N. Mora, C. Schmidt, B. Balderson, C. Frezza, M. Boden

SiRCle integrates multi-omics data to identify regulatory mechanisms and survival-associated markers in clear cell renal cell carcinoma.

Genome Medicine · Dec 4, 2024Peer-reviewedCancer Biology

Conserved epigenetic regulatory logic infers genes governing cell identity

W. J. Shim, E. Sinniah, J. Xu, B. Vitrinel, M. Alexanian, G. Andreoletti, S. Shen, Y. Sun, B. Balderson, C. Boix, G. Peng, N. Jing, Y. Wang, M. Kellis, P. Tam, , N. Palpant

This study introduces a computational method to identify genetic regulators of cell identity using epigenetic data across diverse species and validates findings with CRISPR experiments.

bioRxiv · Oct 9, 2020Cell Biology