Author

M. P. Cox

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Evolutionary Biology· 2 Microbiology· 2

Signature Assays, Organisms & Methods

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Approach:statistical model· 3 Assay:bulk RNA-seq· 2 Research Focus:cell type annotation· 2 Research Focus:gene regulatory network inference· 2 Organism:human· 2 Approach:deep learning· 1 Research Focus:differential expression· 1 Assay:DNA methylation· 1

Frequent Co-Authors

A. Boland· 1 shared A. Cooper· 1 shared B. Hassing· 1 shared B. McGreal· 1 shared C. H. Mesarich· 1 shared C. Olivera· 1 shared C. S. Turney· 1 shared C. Stringer· 1 shared

Activity by Year

2020-2022 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 9 mutual co-author links

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1 shared paperEvolutionary Biology

A. Boland

Mutual co-authors in cluster

Author profile →

4 papers

Recent·Most cited

Positive selection in the genomes of two Papua New Guinean populations at distinct altitude levels

M. Andre, N. Brucato, G. Hudjasov, V. Pankratov, D. Yermakovich, R. Kreevan, J. Kariwiga, J. Muke, A. Boland, J.-F. Deleuze, V. Meyer, N. Evans, M. P. Cox, M. Leavesley, M. Dannemann, , F.-X. Ricaut

This study identifies genomic regions under positive selection in highland and lowland PNG populations, linking them to hypoxia, immunity, and archaic introgression.

bioRxiv · Dec 15, 2022Evolutionary Biology

The Venturia inaequalis effector repertoire is expressed in waves and is dominated by expanded families with predicted structural similarity to avirulence proteins from other plant-pathogenic fungi

M. Rocafort, J. K. Bowen, B. Hassing, M. P. Cox, B. McGreal, S. de la Rosa, K. M. Plummer, R. E. Bradshaw, C. H. Mesarich

The paper characterizes the temporal expression of effector candidates in Venturia inaequalis during apple infection and identifies structural similarities to avirulence proteins from other fungi.

bioRxiv · Mar 22, 2022Microbiology

Correlated transcriptional responses provide insights into the synergy mechanisms of the furazolidone, vancomycin and sodium deoxycholate triple combination in Escherichia coli

C. Olivera, M. P. Cox, G. J. Rowlands, J. Rakonjac

This study investigates the synergy of furazolidone, vancomycin, and sodium deoxycholate in Escherichia coli using transcriptomics, revealing gene expression changes that suggest mechanisms of combined antibacterial effects.

bioRxiv · Jul 13, 2021Microbiology

Introgression, hominin dispersal and megafaunal survival in Late Pleistocene Island Southeast Asia

J. C. Teixeira, G. S. Jacobs, C. Stringer, J. Tuke, G. Hudjashov, G. A. Purnomo, H. Sudoyo, M. P. Cox, R. Tobler, C. S. Turney, A. Cooper, K. M. Helgen

The paper investigates introgression and hominin dispersal in Island Southeast Asia, finding widespread Denisovan ancestry but no evidence of super-archaic hominin admixture.

bioRxiv · Jul 24, 2020 · PreprintEvolutionary Biology