Author

Madhulika Verma

Jawaharlal Nehru University

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 3

Signature Assays, Organisms & Methods

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Organism:human· 3 Approach:statistical model· 3 Research Focus:benchmarking· 2 Assay:bulk RNA-seq· 2 Research Focus:cell type annotation· 2 Research Focus:differential expression· 2 Research Focus:deconvolution· 1 Research Focus:gene regulatory network inference· 1

Activity by Year

2024-2024 · peak 3/yr

3 papers

Recent·Most cited

Immune Infiltration and Survival Analysis in Lung Adenocarcinoma: Identifying Prognostic Cell Types

Madhulika Verma

This study examines the relationship between immune cell infiltration patterns and survival outcomes in lung adenocarcinoma patients using TCGA data.

bioRxiv · May 11, 2024 · PreprintBioinformatics

Assessing Immune Microenvironment in TCGA-LUAD via CIBERSORTx Using Single-Cell Derived Signature Matrix and ESTIMATE Algorithm

Madhulika Verma

This study validates a single-cell derived immune signature matrix using CIBERSORTx and ESTIMATE to assess immune microenvironment in TCGA-LUAD samples.

bioRxiv · May 8, 2024 · PreprintBioinformatics

Unravelling Immune Cell Signatures: CIBERSORTx-assisted Construction of Signature Matrix from Single-Cell Data

Madhulika Verma

The paper constructs a gene signature matrix from single-cell data using CIBERSORTx to represent immune cell types in PBMCs, enhancing the analysis of bulk tissue gene expression profiles.

bioRxiv · May 5, 2024 · PreprintBioinformatics