Author

Marco A. Jimenez-Limas

Instituto Politécnico Nacional

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Systems Biology· 2

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 2 Research Focus:gene regulatory network inference· 2 Organism:plant (other)· 2 Approach:statistical model· 2

Frequent Co-Authors

Katia Aviña‐PadillaiD· 2 shared Maribel Hernández-RosalesiD· 2 shared Octavio Zambada-MorenoiD· 2 shared Rosemarie W. HammondiD· 2 shared Gabriel Emilio Herrera-OropezaiD· 1 shared Peter E. AbrahamianiD· 1 shared

Activity by Year

2022-2023 · peak 1/yr

Co-Author Collaboration Network

6 top collaborators · 15 mutual co-author links

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2 shared papersSystems Biology

Katia Aviña‐PadillaORCID

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2 papers

Recent·Most cited

Dynamic co-expression modular network analysis of bHLH transcription factors regulation in the potato spindle tuber viroid-tomato pathosystem

Katia Aviña‐Padilla, Octavio Zambada-Moreno, Marco A. Jimenez-Limas, Rosemarie W. Hammond, Maribel Hernández-Rosales

The paper analyzes bHLH transcription factor regulation in tomato infected with PSTVd using co-expression modules and identifies their roles in photosynthesis and membrane repair.

bioRxiv · Nov 10, 2023 · PreprintSystems Biology

An integrative approach: using transcriptomic data and network analysis of transcriptional reprogramming in tomato response to PSTVd variants

Katia Aviña‐Padilla, Octavio Zambada-Moreno, Gabriel Emilio Herrera-Oropeza, Marco A. Jimenez-Limas, Peter E. Abrahamian, Rosemarie W. Hammond, Maribel Hernández-Rosales

The paper identifies master transcription regulators and their targets in tomato infected with PSTVd variants, revealing key transcription factors involved in defense and signaling pathways.

bioRxiv · Feb 2, 2022 · PreprintSystems Biology