A Pangenomic Method for Establishing a Somatic Variant Detection Resource in HapMap Mixtures
Nahyun Kong, Zitian Tang, Andrew Ruttenberg, Juan F Macias-Velasco, Zefan Li, Wenjin Zhang, Benpeng Miao, Zilan Xin, Qichen Fu, Haeorum Park, Xiaoyu Zhuo, Elvisa Mehinovic, Edward A. Belter, Chad Tomlinson, John E. Garza, , Sheng Chih Jin
The paper develops a pangenomic method to create a benchmark resource for somatic variant detection using HapMap mixtures, identifying millions of variants across different genomic regions.
bioRxiv · Sep 29, 2025 · PreprintGenomics