Leveraging Human Pangenome for Improved Somatic Variant Detection
Qichen Fu, Zilan Xin, Benpeng Miao, Wenjin Zhang, Nahyun Kong, Zitian Tang, Andrew Ruttenberg, Derek Albracht, Edward A. Belter, John E. Garza, Chad Tomlinson, Elvisa Mehinovic, Jiawei Shen, Xiaoyu Zhuo, Shihua Dong, , Ting Wang
This study shows that using graph-based pangenomes and inferred donor-specific assemblies improves somatic variant detection compared to GRCh38.
bioRxiv · Jan 5, 2026 · PreprintGenomics