Accelerating Identification of Chromatin Accessibility from noisy ATAC-seq Data using Modern CPUs
Narendra Chaudhary, Sanchit Misra, Dhiraj D. Kalamkar, Alexander Heinecke, Evangelos Georganas, Barukh Ziv, Menachem Adelman, Bharat Kaul
The paper accelerates deep learning-based ATAC-seq analysis on CPUs, achieving 2.27x speedup over GPUs using efficient layers and reduced precision training.
bioRxiv · Sep 28, 2021 · PreprintGenomics