Author

Mingjie Yang

Southeast University

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Bioinformatics· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Research Focus:benchmarking· 1 Approach:deep learning· 1 Approach:transformer / foundation model· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Fei SuniD· 1 shared Xiang Zhang· 1 shared Xunhang Yin· 1 shared Yining QianiD· 1 shared

Activity by Year

2025-2025 · peak 1/yr

Co-Author Collaboration Network

4 top collaborators · 6 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

1 shared paperBioinformatics

Fei SunORCID

Mutual co-authors in cluster

Author profile →

1 paper

Recent·Most cited

DeepGene: An Efficient Foundation Model for Genomics based on Pan-genome Graph Transformer

Xiang Zhang, Mingjie Yang, Xunhang Yin, Yining Qian, Fei Sun

DeepGene is a foundation model for genomics that addresses genetic language diversity, model efficiency, and length extrapolation, achieving top performance on 9 out of 28 genome understanding tasks.

IEEE Transactions on Computational Biology and Bioinformatics · Sep 25, 2025Peer-reviewedBioinformatics