Author

Muhammad Ali Khan

Mayo Clinic Hospital

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 2 Bioengineering· 1

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 3 Approach:benchmark study· 2 Approach:statistical model· 2 Approach:deep learning· 1

Frequent Co-Authors

Kaneez Zahra Rubab Khakwani· 3 shared Mohamad Bassam SonboliD· 3 shared Irbaz Bin RiaziD· 2 shared Vivek GuptaiD· 2 shared Anirudh Iyengar Kaniyar Narayana IyengariD· 1 shared Gaurav Najpande· 1 shared Irbaz Riaz· 1 shared Karan Kathuria· 1 shared

Activity by Year

2026-2026 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

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3 shared papersBioinformatics

Kaneez Zahra Rubab Khakwani

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

Version-aware question answering over living oncology guidelines

Tampu Ravi Kumar, Anirudh Iyengar Kaniyar Narayana Iyengar, Muhammad Ali Khan, Kaneez Zahra Rubab Khakwani, Karan Kathuria, Mohamad Bassam Sonbol, Irbaz Bin Riaz, Vivek Gupta

The paper evaluates how AI systems handle version changes in oncology guidelines, finding that retrieval from multiple versions can lead to outdated answers, and introduces a verification system to reduce errors.

bioRxiv · Oct 11, 2026 · PreprintBioinformatics

Reliable extraction of clinical-trial evidence with provenance, verification, and targeted review

Gaurav Najpande, Prasham Titiya, Muhammad Ali Khan, Kaneez Zahra Rubab Khakwani, Mohamad Bassam Sonbol, Irbaz Bin Riaz, Vivek Gupta

The paper evaluates EviSearch, a clinical evidence-curation system, showing high accuracy and improved results with targeted review.

bioRxiv · Oct 8, 2026 · PreprintBioinformatics

Answering clinicians' questions over trial evidence tables with verifiable, feedback-driven language models

Manan Roy Choudhury, Suparno Roy Chowdhury, Swastik Sahoo, Muhammad Ali Khan, Kaneez Zahra Rubab Khakwani, Mohamad Bassam Sonbol, Irbaz Riaz, Vivek Gupta

FD-SCoPE answers clinician questions about clinical trial evidence tables using language models, providing verifiable answers and learning from expert feedback.

bioRxiv · Oct 5, 2026 · PreprintBioengineering