Author

Nate Roethler

University of California San Diego

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1

Signature Assays, Organisms & Methods

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Research Focus:database / resource· 1 Assay:protein sequence· 1 Approach:statistical model· 1

Frequent Co-Authors

Adrián JinichiD· 1 shared Adriana Siordia· 1 shared Ailyn López Jasso· 1 shared Javier Espinoza-HerreraiD· 1 shared Juan P. Ruiz-Alcocer· 1 shared María F. Manríquez-García· 1 shared Sarah Marta VeskimägiiD· 1 shared Sofía Medina-Bermejo· 1 shared

Activity by Year

2026-2026 · peak 1/yr

Co-Author Collaboration Network

8 top collaborators · 28 mutual co-author links

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1 shared paperBioinformatics

Adrián JinichORCID

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1 paper

Recent·Most cited

Protein Language Visualizer: A Repository for Homology Exploration with Language Model Embeddings

Javier Espinoza-Herrera, María F. Manríquez-García, Sofía Medina-Bermejo, Ailyn López Jasso, Juan P. Ruiz-Alcocer, Adriana Siordia, Sarah Marta Veskimägi, Nate Roethler, Adrián Jinich

The paper introduces PLVis, a framework using protein language model embeddings to visualize and explore protein homology, validated through case studies on Mycobacterium and Plasmodium proteomes.

Digital Discovery · Jan 1, 2026Peer-reviewedBioinformatics