Author

Ni Shuang

Mila - Quebec Artificial Intelligence Institute

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1

Signature Assays, Organisms & Methods

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Approach:optimal transport· 1 Assay:scRNA-seq· 1 Assay:spatial transcriptomics· 1 Research Focus:trajectory inference· 1

Frequent Co-Authors

Alistair Wilkinson· 1 shared Christopher J. TapeiD· 1 shared Gerstein Mark· 1 shared Guillaume HuguetiD· 1 shared Guy WolfiD· 1 shared Ke XuiD· 1 shared Smita KrishnaswamyiD· 1 shared

Activity by Year

2026-2026 · peak 1/yr

Co-Author Collaboration Network

7 top collaborators · 21 mutual co-author links

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1 shared paperBioinformatics

Alistair Wilkinson

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1 paper

Recent·Most cited

GeoSinkhorn Flow: Geometry-Aware Flow Matching for Perturbation-Conditioned Dynamics in Single cell Data Phenoscapes

Ke Xu, Alistair Wilkinson, Ni Shuang, Guillaume Huguet, Gerstein Mark, Guy Wolf, Christopher J. Tape, Smita Krishnaswamy

GeoSinkhorn Flow converts static phenoscapes into dynamic ones by learning perturbation-conditioned transport trajectories that respect the phenoscape's geometry and generalize to unseen conditions.

bioRxiv · Oct 22, 2026 · PreprintBioinformatics