Author

Nicole M. Davis

Stanford Medicine

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

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Bioinformatics· 1

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Organism:bacteria (other)· 1 Assay:bulk RNA-seq· 1 Research Focus:deconvolution· 1 Organism:human· 1 Assay:metagenomics· 1 Research Focus:software / tool· 1 Approach:statistical model· 1

Frequent Co-Authors

Benjamin J. CallahaniD· 1 shared David A. RelmaniD· 1 shared Diana M. ProctoriD· 1 shared Susan HolmesiD· 1 shared

Activity by Year

2018-2018 · peak 1/yr

Co-Author Collaboration Network

4 top collaborators · 6 mutual co-author links

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1 shared paperBioinformatics

Benjamin J. CallahanORCID

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1 paper

Recent·Most cited

Simple statistical identification and removal of contaminant sequences in marker-gene and metagenomics data

Nicole M. Davis, Diana M. Proctor, Susan Holmes, David A. Relman, Benjamin J. Callahan

decontam, an R package, classifies contaminant sequences in marker-gene and metagenomic data by their inverse frequency-DNA concentration relationship and higher prevalence in negative controls.

Microbiome · Dec 1, 2018Peer-reviewedBioinformatics✦ In-depth digest