Contrasting Sequence with Structure: Pre-training Graph Representations with PLMs
Louis Robinson, Timothy J. Atkinson, Liviu Copoiu, Patrick Bordes, Thomas Pierrot, Thomas D. Barrett
The paper introduces BioCLIP, a contrastive learning framework for pre-training Protein Structure Models using Protein Language Models, achieving performance comparable to specialized methods on various tasks.
bioRxiv · Dec 1, 2023 · PreprintBioinformatics