CHiCAGO: Robust Detection of DNA Looping Interactions in Capture Hi-C data
Jonathan Cairns, Paula Freire-Pritchett, Steven W. Wingett, Csilla Várnai, Andrew Dimond, Vincent Plagnol, Daniel Zerbino, Stefan Schoenfelder, Biola-Maria Javierre, Cameron Osborne, Peter Fraser, Mikhail Spivakov
CHiCAGO detects DNA looping interactions in Capture Hi-C data by addressing statistical challenges with a background model and normalization algorithms, showing enrichment for regulatory features and disease SNPs.
Genome Biology · Jun 15, 2016Peer-reviewedGenomics