Author

Pengzhen Hu

Academy of Military Medical Sciences

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Bioinformatics· 1

Signature Assays, Organisms & Methods

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Assay:ATAC-seq· 1 Approach:benchmark study· 1 Research Focus:benchmarking· 1 Approach:deep learning· 1

Frequent Co-Authors

Canzhuang Sun· 1 shared Hebing CheniD· 1 shared Kang XuiD· 1 shared Mingzhi LiaoiD· 1 shared Xiang Shang XuiD· 1 shared Xiaochen BoiD· 1 shared Xuanwei LiniD· 1 shared Yaru LiiD· 1 shared

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1 shared paperBioinformatics

Canzhuang Sun

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1 paper

Recent·Most cited

A comprehensive benchmark and guide for sequence-function interpretable deep learning models in genomics

Canzhuang Sun, Yu Sun, Kang Xu, Zhijie He, Zhengwei Li, Yaru Li, YU Zong-yuan, Yuyang Wang, Xuanwei Lin, Xiang Shang Xu, Pengzhen Hu, Xiaochen Bo, Mingzhi Liao, Hebing Chen

This paper benchmarks sequence-function deep learning models using ATAC-seq data, showing that different models and interpretability methods are better suited to specific tasks.

bioRxiv · Jan 6, 2025 · PreprintBioinformatics