Machine Learning-Enhanced Nanopore ITS Analysis: Evaluating CPU-GPU Pipelines for High-Accuracy Fungal Taxonomic Resolution
Daniel Albuja, Peter Zambrano, Paolo Maldonado, J. Riczury Olmos-Tovar, Edwin Vera
This paper evaluates CPU and GPU-based workflows for high-accuracy fungal ITS metabarcoding using machine learning, showing GPU processing improves species-level accuracy while CPU workflows achieve genus-level concordance.
bioRxiv · Apr 7, 2026 · PreprintBioinformatics