R. R. Rohwer

Time-series metagenomics reveals changing protistan ecology of a temperate dimictic lake

The paper analyzes time-series metagenomic data from Lake Mendota to study changes in protistan ecology, revealing shifts in community structure linked to invasive species and environmental factors.

A 20-year time-series of a freshwater lake reveals seasonal dynamics and environmental drivers of viral diversity, ecology, and evolution

The paper analyzes a 20-year viral time-series in a freshwater lake to uncover seasonal dynamics, environmental drivers, and evolutionary patterns of viral diversity and ecology.

Bacterial ecology and evolution converge on seasonal and decadal scales

The paper analyzes a two-decade freshwater lake metagenome dataset to show that ecological and evolutionary processes in microbial communities operate on seasonal and decadal scales.

The aftermath of a trophic cascade: Increasedanoxia following species invasion of a eutrophiclake

This paper shows that an invasive zooplankton caused a trophic cascade leading to increased phytoplankton, which in turn caused more anoxia in a lake.

A two-decade microbial time series from a freshwater lake, introducing the limony and TYMEFLIES datasets

The paper introduces two microbial time series datasets from Lake Mendota, providing long-term microbial and environmental data for ecological and evolutionary research.

Species invasions shift microbial phenology in a two-decade freshwater time series

The paper examines how invasive species alter microbial phenology over two decades in freshwater ecosystems, finding shifts in Cyanobacteria, cyanotoxins, and heterotrophic bacteria patterns following invasions.

Connections between freshwater carbon and nutrient cycles revealed through reconstructed population genomes

The paper links freshwater carbon and nutrient cycles by analyzing microbial population genomes and marker genes from two aquatic environments, showing co-occurrence of metabolic pathways and taxonomic patterns.