Author

Ruth E. Baker

Primary ORCID profile (0000-0002-6304-9333 · 24 papers)Unclaimed ORCID profile · follow to get notified of new preprints

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Ruth E. BakeriD24 papers · University of Oxford

Biology Disciplines

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Systems Biology· 2 Biophysics· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 3

Frequent Co-Authors

Alexander G. Fletcher· 1 shared David J. Warne· 1 shared Fergus R. CooperiD· 1 shared Matthew J Simpson· 1 shared Matthew J. Simpson· 1 shared

Activity by Year

2015-2016 · peak 2/yr

Co-Author Collaboration Network

5 top collaborators · 2 mutual co-author links

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1 shared paperSystems Biology

Alexander G. Fletcher

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3 papers

Recent·Most cited

Numerical Analysis of the Immersed Boundary Method for Cell-Based Simulation

Fergus R. Cooper, Ruth E. Baker, Alexander G. Fletcher

This paper presents an efficient, open-source implementation of the immersed boundary method for simulating cell population dynamics, providing scaling relationships for accurate parameterization.

bioRxiv · Aug 24, 2016 · PreprintSystems Biology

Accelerating computational Bayesian inference for stochastic biochemical reaction network models using multilevel Monte Carlo sampling

David J. Warne, Ruth E. Baker, Matthew J. Simpson

This study introduces a multilevel Monte Carlo sampling method to accelerate Bayesian inference for stochastic biochemical reaction network models, achieving up to an order of magnitude computational gain with minimal accuracy loss.

bioRxiv · Jul 15, 2016 · PreprintSystems Biology

Quantifying transport in crowded biochemical environments

Ruth E. Baker, Matthew J Simpson

The paper investigates quantifying transport in crowded environments using a random walk model and shows that reliable predictions are possible but require large data and careful model selection.

bioRxiv · Feb 2, 2015 · PreprintBiophysics