Author

Ryan Hulke

University of Florida

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1

Signature Assays, Organisms & Methods

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Research Focus:gene regulatory network inference· 1 Approach:machine learning (classical)· 1 Assay:protein structure· 1 Research Focus:protein structure prediction· 1 Approach:statistical model· 1

Frequent Co-Authors

José Cleydson F. SilvaiD· 1 shared Layla A. SchusteriD· 1 shared Márcio F. R. ResendeiD· 1 shared Matias KirstiD· 1 shared Melissa Erdem· 1 shared Nick Sexson· 1 shared Raquel DiasiD· 1 shared

Activity by Year

2025-2025 · peak 1/yr

Co-Author Collaboration Network

7 top collaborators · 21 mutual co-author links

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1 shared paperBioinformatics

José Cleydson F. SilvaORCID

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1 paper

Recent·Most cited

InteracTor: Feature Engineering and Explainable AI for Profiling Protein Structure-Interaction-Function Relationships

José Cleydson F. Silva, Layla A. Schuster, Nick Sexson, Melissa Erdem, Ryan Hulke, Matias Kirst, Márcio F. R. Resende, Raquel Dias

InteracTor extracts 3D structural interaction features and uses XAI to improve protein family classification beyond primary/secondary structure features.

PLoS Computational Biology · Oct 13, 2025Peer-reviewedBioinformatics