Author

S. Assenza

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Signature Assays, Organisms & Methods

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Approach:statistical model· 3 Research Focus:benchmarking· 1 Approach:deep learning· 1 Assay:DNA methylation· 1 Research Focus:protein folding & dynamics· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

R. Perez· 2 shared C. Roldan-Pinero· 1 shared H. V. Guzman· 1 shared J. Luengo-Marquez· 1 shared S. Cruz-Leon· 1 shared S. Poblete· 1 shared

Activity by Year

2021-2023 · peak 2/yr

Co-Author Collaboration Network

6 top collaborators · 6 mutual co-author links

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2 shared papersBiophysics

R. Perez

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3 papers

Recent·Most cited

Systematic comparison of Amber force fields for the mechanical properties of double-stranded DNA

C. Roldan-Pinero, J. Luengo-Marquez, S. Assenza, R. Perez

The paper compares the mechanical properties of double-stranded DNA predicted by different force fields under external stress.

bioRxiv · Sep 25, 2023 · PreprintBiophysics

RNA multiscale simulations as an interplay of electrostatic, mechanical properties, and structures inside viruses

S. Cruz-Leon, S. Assenza, S. Poblete, H. V. Guzman

This paper reviews multiscale simulation methods for studying RNA structure and function, focusing on electrostatic, mechanical properties, and interactions within viral systems.

bioRxiv · Mar 30, 2023 · PreprintBiophysics

Accurate sequence-dependent coarse-grained model for conformational and elastic properties of double-stranded DNA

S. Assenza, R. Perez

The paper introduces MADna, a sequence-dependent coarse-grained model of dsDNA that accurately captures conformational and elastic properties, matching atomistic simulations and experimental data.

bioRxiv · Dec 2, 2021 · PreprintBiophysics