Author

S. Cauet

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Plant Biology· 3

Signature Assays, Organisms & Methods

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Approach:statistical model· 3 Research Focus:gene regulatory network inference· 2 Organism:plant (other)· 2 Assay:whole-genome sequencing· 2 Assay:bulk RNA-seq· 1 Research Focus:chromatin & epigenetic regulation· 1 Research Focus:clustering· 1 Approach:deep learning· 1

Frequent Co-Authors

C. Libourel· 2 shared J. Keller· 2 shared P.-M. Delaux· 2 shared A. Barnaud· 1 shared A. Braeutigam· 1 shared A. Meierhenrich· 1 shared A. Suin· 1 shared A. Theron· 1 shared

Activity by Year

2020-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 28 mutual co-author links

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2 shared papersPlant Biology

C. Libourel

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Author profile →

3 papers

Recent·Most cited

The Marchantia pangenome reveals ancient mechanisms of plant adaptation to the environment

C. Beaulieu, C. Libourel, D.-L. Mbadinga Zamar, K. El Mahboubi, D. J. Hoey, J. Keller, C. Girou, H. San Clemente, I. Diop, E. Amblard, A. Theron, S. Cauet, N. Rodde, Z. Sabine, W. Halpape, , P.-M. Delaux

This study analyzes the pangenome of Marchantia polymorpha to identify genetic features involved in plant adaptation to terrestrial environments, finding shared and lineage-specific genes with flowering plants.

bioRxiv · Oct 27, 2023 · PreprintPlant Biology

Comparative phylotranscriptomics reveals a 110 million years-old symbiotic program

C. Libourel, J. Keller, L. Brichet, A.-C. Cazale, S. Carrere, T. Vernie, J.-M. Couzigou, C. Callot, I. Dufau, S. Cauet, W. Marande, T. Bulach, A. Suin, C. Masson-Boivin, P. Remigi, , D. Capela

This study reconstructs the ancestral transcriptomic program for root-nodule nitrogen-fixing symbiosis by comparing transcriptomic responses across nine host plants, revealing most RNS novelties originated in a 110 million-year-old ancestor.

bioRxiv · Sep 2, 2022 · PreprintPlant Biology

Fonio millet genome unlocks African orphan crop diversity for agriculture in a changing climate

M. Abrouk, H. I. Ahmed, P. CUBRY, D. Simonikova, S. Cauet, J. Bettgenhaeuser, L. Gapa, Y. Pailles, N. Scarcelli, M. Couderc, L. Zekraoui, N. Kathiresan, J. Cizkova, E. Hribova, J. Dolezel, , S. G. Krattinger

The paper presents a high-quality genome assembly and re-sequencing data for fonio millet to study its genetic diversity and domestication.

bioRxiv · Apr 11, 2020Plant Biology