Author

Sarah J Wheelan

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1

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Approach:deep learning· 1 Research Focus:sequence-to-function modeling· 1 Approach:statistical model· 1 Research Focus:variant calling· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Alex Szalay· 1 shared Ben Langmead· 1 shared Richard Wilton· 1 shared Steven Salzberg· 1 shared Tamas Budavari· 1 shared

Activity by Year

2014-2014 · peak 1/yr

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5 top collaborators · 10 mutual co-author links

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1 shared paperBioinformatics

Alex Szalay

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1 paper

Recent·Most cited

Faster sequence alignment through GPU-accelerated restriction of the seed-and-extend search space

Richard Wilton, Tamas Budavari, Ben Langmead, Sarah J Wheelan, Steven Salzberg, Alex Szalay

The paper introduces A21, a GPU-accelerated read aligner that improves speed and sensitivity by restricting the seed-and-extend search space using parallel sort and reduction techniques.

bioRxiv · Aug 1, 2014Bioinformatics