Author

Sean E. Corbett

Boston University

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Research Focus:clustering· 2 Organism:human· 2 Assay:scRNA-seq· 2 Research Focus:batch correction / integration· 1 Approach:Bayesian inference· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Organism:mouse· 1

Frequent Co-Authors

Joshua David CampbelliD· 2 shared Masanao YajimaiD· 2 shared Shiyi YangiD· 2 shared William Evan JohnsoniD· 2 shared Yusuke KogaiD· 2 shared Zhe WangiD· 2 shared Conor V. SheaiD· 1 shared

Activity by Year

2020-2022 · peak 1/yr

Co-Author Collaboration Network

7 top collaborators · 21 mutual co-author links

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2 shared papersBioinformatics

Joshua David CampbellORCID

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2 papers

Recent·Most cited

Celda: A Bayesian model to perform co-clustering of genes into modules and cells into subpopulations using single-cell RNA-seq data

Zhe Wang, Shiyi Yang, Yusuke Koga, Sean E. Corbett, Conor V. Shea, William Evan Johnson, Masanao Yajima, Joshua David Campbell

Celda identifies transcriptional modules and cell subpopulations in scRNA-seq data, outperforming existing methods in detecting biological programs and cell types.

NAR Genomics and Bioinformatics · Jul 9, 2022Peer-reviewedBioinformatics

Decontamination of ambient RNA in single-cell RNA-seq with DecontX

Shiyi Yang, Sean E. Corbett, Yusuke Koga, Zhe Wang, William Evan Johnson, Masanao Yajima, Joshua David Campbell

DecontX is a Bayesian method to remove ambient RNA contamination in scRNA-seq data, improving cell cluster separation and marker gene accuracy.

Genome biology · Mar 5, 2020Peer-reviewedBioinformatics