Haplotype Matching with GBWT for Pangenome Graphs
Ahsan Sanaullah, Seba Villalobos, Degui Zhi, Shaojie Zhang
This paper defines haplotype matches in pangenome graphs and provides efficient algorithms for querying them using GBWT and related data structures.
bioRxiv · Feb 3, 2025 · PreprintBioinformatics