Author

SeyedMohsen Hosseini

Western University

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Biology Disciplines

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Bioinformatics· 3

Signature Assays, Organisms & Methods

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Assay:protein sequence· 2 Research Focus:protein structure prediction· 2 Assay:bulk RNA-seq· 1 Approach:deep learning· 1 Research Focus:dimensionality reduction· 1 Organism:human· 1 Approach:machine learning (classical)· 1 Approach:transformer / foundation model· 1

Frequent Co-Authors

Geoffrey Brian GoldingiD· 2 shared Lucian IlieiD· 2 shared Divya SharmaiD· 1 shared

Activity by Year

2024-2026 · peak 1/yr

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3 top collaborators · 1 mutual co-author link

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2 shared papersBioinformatics

Geoffrey Brian GoldingORCID

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3 papers

Recent·Most cited

TifBERT: a self-supervised foundation model for normalization-robust bulk RNA-seq representation learning

SeyedMohsen Hosseini, Divya Sharma

TifBERT is a self-supervised foundation model for bulk RNA-seq that learns normalization-robust representations without expression discretization or external embeddings, achieving high accuracy and capturing pathway-level biology.

bioRxiv · Jun 11, 2026 · PreprintBioinformatics

C3PI: Component Puzzle Protein-Protein Interaction Prediction

SeyedMohsen Hosseini, Geoffrey Brian Golding, Lucian Ilie

C3PI is a deep learning framework for predicting protein-protein interactions that outperforms existing methods, especially on leakage-free datasets.

bioRxiv · Jul 26, 2025 · PreprintBioinformatics

Seq-InSite: sequence supersedes structure for protein interaction site prediction

SeyedMohsen Hosseini, Geoffrey Brian Golding, Lucian Ilie

Seq-InSite predicts protein interaction sites using sequence data, outperforming sequence-based models and matching structure-based predictors.

Bioinformatics · Jan 1, 2024Peer-reviewedBioinformatics