Author

Shahab Shams

The University of Texas at Dallas

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1

Signature Assays, Organisms & Methods

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Research Focus:clustering· 1 Approach:deep learning· 1 Research Focus:dimensionality reduction· 1 Assay:protein sequence· 1 Approach:statistical model· 1

Frequent Co-Authors

Eyal AkivaiD· 1 shared Geoffroy Dubourg-Felonneau· 1 shared Lawrence Lee· 1 shared

Activity by Year

2021-2021 · peak 1/yr

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3 top collaborators · 3 mutual co-author links

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1 shared paperBioinformatics

Eyal AkivaORCID

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1 paper

Recent·Most cited

Protein Organization with Manifold Exploration and Spectral Clustering

Geoffroy Dubourg-Felonneau, Shahab Shams, Eyal Akiva, Lawrence Lee

The paper introduces an unsupervised method using Transformer models, UMAP, and spectral clustering to organize protein sequences into biologically meaningful clusters.

bioRxiv · Dec 8, 2021 · PreprintBioinformatics