Improving plant functional annotation from knowledge graphs using Graph Neural Networks
Tran Gia Bao Ngo, Christophe Liseron-Monfils, Shreyan Das, Jordan R. Ubbens, Paula C. Ashe, David Konkin
This paper develops a knowledge graph and uses graph neural networks to improve gene functional annotation in plants, outperforming orthology-based methods in transferring knowledge between species.
bioRxiv · May 7, 2025 · PreprintSystems Biology