Author

Soham Mandal

European Bioinformatics InstitutePrimary ORCID profile (0009-0002-4882-4298 · 1 paper)Unclaimed ORCID profile · follow to get notified of new preprints

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Same name, identified by ORCID

Soham MandaliD1 paper · Institute of Cancer Research

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Approach:deep learning· 2 Assay:imaging· 2 Research Focus:cell type annotation· 1 Research Focus:clustering· 1 Research Focus:dimensionality reduction· 1 Approach:statistical model· 1

Frequent Co-Authors

Virginie UhlmanniD· 2 shared

Activity by Year

2021-2021 · peak 2/yr

2 papers

Recent·Most cited

SplineDist: Automated Cell Segmentation with Spline Curves

Soham Mandal, Virginie Uhlmann

SplineDist improves cell segmentation by using spline curves instead of star-convex polygons, achieving comparable quality with a smaller network and better handling of complex shapes.

IEEE International Symposium on Biomedical Imaging (ISBI) · Apr 13, 2021Peer-reviewedBioinformatics

A Learning-Based Formulation of Parametric Curve Fitting for Bioimage Analysis

Soham Mandal, Virginie Uhlmann

This paper introduces a convolutional neural network to predict continuous parametric representations of biological object outlines, tested on cell nucleus images from a public dataset.

Lecture notes in computational science and engineering · Jan 1, 2021Peer-reviewedBioinformatics