Author

Sylvain Riondet

Agency for Science, Technology and Research

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Biology Disciplines

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Bioinformatics· 1

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Approach:benchmark study· 1 Research Focus:benchmarking· 1 Assay:long-read sequencing· 1 Assay:metagenomics· 1

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Josip MarićiD· 1 shared Krešimir KrižanovićiD· 1 shared Mile ŠikićiD· 1 shared Niranjan NagarajaniD· 1 shared

Activity by Year

2024-2024 · peak 1/yr

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1 shared paperBioinformatics

Josip MarićORCID

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1 paper

Recent·Most cited

Comprehensive benchmarking of metagenomic classification tools for long-read sequencing data

Josip Marić, Krešimir Križanović, Sylvain Riondet, Niranjan Nagarajan, Mile Šikić

The paper benchmarks metagenomic classification tools for long-read sequencing data, finding that general-purpose mappers outperform classification tools in accuracy but are slower, while kmer-based tools are faster but less accurate.

BMC Bioinformatics · Jan 11, 2024Peer-reviewedBioinformatics