Author

T. A. Chapman

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 3 Plant Biology· 1

Signature Assays, Organisms & Methods

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Organism:plant (other)· 3 Assay:metagenomics· 2 Approach:statistical model· 2 Organism:bacteria (other)· 1 Research Focus:cell type annotation· 1 Approach:comparative / phylogenetic analysis· 1 Research Focus:development & morphogenesis· 1 Assay:DNA methylation· 1

Frequent Co-Authors

A. E. Darling· 2 shared D. Gaio· 2 shared K. Anantanawat· 2 shared M. Z. DeMaere· 2 shared S. P. Djordjevic· 2 shared A. B. Crockford· 1 shared A. L. Perez Quintero· 1 shared A. M. Alvarez· 1 shared

Activity by Year

2019-2020 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 14 mutual co-author links

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2 shared papersMicrobiology

A. E. Darling

Mutual co-authors in cluster

Author profile →

4 papers

Recent·Most cited

Post-weaning shifts in microbiome composition and metabolism revealed by over 25,000 pig gut metagenome assembled genomes

D. Gaio, M. Z. DeMaere, K. Anantanawat, T. A. Chapman, S. P. Djordjevic, A. E. Darling

The paper analyzes over 25,000 pig gut metagenome assembled genomes to reveal post-weaning microbiome shifts and metabolic capabilities.

bioRxiv · Aug 17, 2020Microbiology

Phylogenetic diversity analysis of shotgun metagenomic reads describes gut microbiome development and treatment effects in the post-weaned pig

D. Gaio, M. Z. DeMaere, K. Anantanawat, G. J. Eamens, T. Zingali, L. Falconer, T. A. Chapman, S. P. Djordjevic, A. E. Darling

bioRxiv · Jul 20, 2020Microbiology

Comparative genomics reveals signature regions used to develop a robust and sensitive multiplex TaqMan real-time qPCR assay to detect the genus Dickeya and Dickeya dianthicola

S. Dobhal, G. Boluk, B. Babler, M. J. Stulberg, J. Rascoe, M. Nakhla, T. A. Chapman, A. B. Crockford, M. Melzer, A. M. Alvarez, M. Arif

The paper develops a multiplex TaqMan qPCR assay for sensitive detection of Dickeya spp. and D. dianthicola using comparative genomics to identify signature regions.

bioRxiv · Nov 20, 2019Plant Biology

Genomic acquisitions in emerging populations of Xanthomonas vasicola pv. vasculorum infecting corn in the U.S. and Argentina

A. L. Perez Quintero, M. Ortiz-Castro, G. Wu, J. M. Lang, S. Liu, T. A. Chapman, C. Chang, J. Ziegle, Z. Peng, F. F. White, M. C. Plazas, J. E. Leach, K. Broders

The paper identifies gene acquisitions in Xanthomonas vasicola pv. vasculorum genomes from the U.S. and Argentina, linking them to increased virulence through horizontal gene transfer, including a prophage from X. vasicola pv. holcicola.

bioRxiv · Mar 25, 2019Microbiology