Inherent population structure determines the importance of filtering parameters for reduced representation sequencing analyses
D. Selechnik, Mark F. Richardson, Melanie K. Hess, Andrew S. Hess, K. G. Dodds, Michael V. Martin, T.C. Chan, Adam P. A. Cardilini, Craig D. H. Sherman, Richard Shine, Lee Ann Rollins
The paper shows that filtering parameter choices in reduced representation sequencing analyses impact population structure detection, depending on the inherent genetic differentiation of the dataset.
bioRxiv · Nov 14, 2020 · PreprintBioinformatics