CARD k-mers: Unmasking the pathogen hosts and genomic contexts of antimicrobial resistance genes in metagenomic sequences
Mateusz A. Wlodarski, Tammy Lau, Brian P. Alcock, Amogelang R. Raphenya, Tiffany E. Ta, Finlay Maguire, Robert Gerald Beiko, Andrew G. McArthur
CARD k-mers classifies antimicrobial resistance genes in metagenomic data by predicting taxonomy and genomic context, outperforming existing tools in accuracy and speed.
bioRxiv · Sep 15, 2025 · PreprintBioinformatics