Author

Todd Riley

University of Massachusetts Boston

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1

Signature Assays, Organisms & Methods

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Assay:ChIP-seq· 1 Research Focus:gene regulatory network inference· 1 Approach:statistical model· 1

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Kourosh ZarringhalamiD· 1 shared Saman FarahmandiD· 1 shared

Activity by Year

2019-2019 · peak 1/yr

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1 paper

Recent·Most cited

ModEx: A text mining system for extracting mode of regulation of Transcription Factor-gene regulatory interaction

Saman Farahmand, Todd Riley, Kourosh Zarringhalam

ModEx extracts mode of regulation (activation/repression) for TF-gene interactions from ChIP-Seq data using text mining and achieves high F-scores on curated datasets.

Journal of Biomedical Informatics · Dec 16, 2019Peer-reviewedBioinformatics