U. Mohanty

SMOG 2 and OpenSMOG: Extending the limits of structure-based models

This paper introduces SMOG 2 and OpenSMOG, extending structure-based models to handle large biomolecular systems with enhanced customization and integration with OpenMM.

Diffuse ions coordinate dynamics in a ribonucleoprotein assembly

The paper presents a model to quantify the impact of diffuse ions on RNP assembly dynamics, showing their role in controlling tRNA movement during translation.