Author

Varun Srinivasan

Cornell University

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1 Microbiology· 1

Signature Assays, Organisms & Methods

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Assay:metagenomics· 2 Research Focus:benchmarking· 1 Research Focus:cell type annotation· 1 Research Focus:clustering· 1 Approach:deep learning· 1 Research Focus:dimensionality reduction· 1 Approach:machine learning (classical)· 1 Assay:proteomics· 1

Frequent Co-Authors

April Z. GuiD· 2 shared Guangyu LiiD· 2 shared Chieh Wu· 1 shared David R KaeliiD· 1 shared Dongqi WangiD· 1 shared Il HaniD· 1 shared Jangho Lee· 1 shared Jennifer DyiD· 1 shared

Activity by Year

2020-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

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2 shared papersMicrobiology

April Z. GuORCID

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Author profile →

2 papers

Recent·Most cited

Discovering Polyphosphate and Polyhydroxyalkanoate-Accumulating Organisms Across Ecosystems: Phenotype-targeted Genotyping via FACS-sequencing

Yuan Yan, Mathew Baldwin, Jangho Lee, Zijian Leo Wang, Guangyu Li, Il Han, Peisheng He, Varun Srinivasan, Liam Wickes-Do, Michael A. Gore, April Z. Gu

This study introduces TriFlow-Seq, a method combining FACS and 16S rRNA sequencing to identify PHA-PAOs in EBPR systems and soil, revealing new candidates and their ecological roles.

Environmental Science & Technology · Dec 23, 2025Peer-reviewedMicrobiology

Machine Leaning-based Determination of Sampling Depth for Complex Environmental Systems: Case Study with Single-Cell Raman Spectroscopy Data in EBPR Systems

Guangyu Li, Chieh Wu, Dongqi Wang, Varun Srinivasan, David R Kaeli, Jennifer Dy, April Z. Gu

The paper develops a machine learning-based method to determine optimal sampling depth for complex environmental systems using single-cell Raman spectroscopy data from EBPR systems.

bioRxiv · Dec 18, 2020 · PreprintBioinformatics