Author

Vikraman Karunanidhi

Systems Biology Institute

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

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Pharmacology & Toxicology· 1

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Assay:bulk RNA-seq· 1 Research Focus:clustering· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Approach:statistical model· 1

Frequent Co-Authors

Hiroaki KitanoiD· 1 shared Jun KannoiD· 1 shared Ken‐ichi Aisaki· 1 shared Natalia PolouliakhiD· 1 shared Samik GhoshiD· 1 shared Sucheendra K. PalaniappaniD· 1 shared

Activity by Year

2025-2025 · peak 1/yr

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1 shared paperPharmacology & Toxicology

Hiroaki KitanoORCID

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1 paper

Recent·Most cited

Clustering Gene Co-expression Using 2D Contour Analysis and Autoencoder-based Embedding

Vikraman Karunanidhi, Ken‐ichi Aisaki, Jun Kanno, Natalia Polouliakh, Samik Ghosh, Hiroaki Kitano, Sucheendra K. Palaniappan

The paper introduces a framework using 2D contour analysis and autoencoder embeddings to cluster co-expressed genes, achieving high correlation with visual coherence.

bioRxiv · Sep 7, 2025 · PreprintPharmacology & Toxicology