Author

Xun Song

New Jersey Institute of Technology

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Organism:human· 2 Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Organism:mouse· 1 Assay:scRNA-seq· 1

Frequent Co-Authors

Zhi WeiiD· 2 shared Cong QiiD· 1 shared Siqi JiangiD· 1 shared Yeqing CheniD· 1 shared

Activity by Year

2026-2026 · peak 2/yr

Co-Author Collaboration Network

4 top collaborators · 6 mutual co-author links

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2 shared papersBioinformatics

Zhi WeiORCID

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2 papers

Recent·Most cited

FedEdgeR: federated and privacy-preserving edgeR for differential gene expression analysis

Xun Song, Zhi Wei

FedEdgeR enables federated differential gene expression analysis while preserving privacy, outperforming meta-analysis methods and matching pooled edgeR results.

bioRxiv · Sep 24, 2026 · PreprintBioinformatics

CellPilot: an agentic framework that pilots small language models through autonomous single-cell annotation

Siqi Jiang, Cong Qi, Yeqing Chen, Xun Song, Zhi Wei

CellPilot improves single-cell annotation accuracy by integrating small language models into a structured workflow, achieving performance close to larger models while maintaining transparency.

bioRxiv · Jul 10, 2026 · PreprintBioinformatics