Author

Yanghe Xie

Anhui Agricultural University

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Genetics· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Approach:machine learning (classical)· 2 Research Focus:variant effect prediction· 2 Assay:whole-genome sequencing· 2 Organism:bacteria (other)· 1 Research Focus:differential expression· 1 Organism:E. coli· 1 Research Focus:gene regulatory network inference· 1 Organism:multiple species· 1

Frequent Co-Authors

Guomin HaniD· 2 shared Chuangchuang XuiD· 1 shared Chuanhong WangiD· 1 shared Geyi Zhu· 1 shared Haida Liu· 1 shared Jiajing TangiD· 1 shared Jianqiang ShiiD· 1 shared Jinming MaiD· 1 shared

Activity by Year

2023-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 27 mutual co-author links

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2 shared papersGenomics

Guomin HanORCID

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2 papers

Recent·Most cited

Decoding functional genes across species with annotation-independent machine learning

Yanghe Xie, Leyu Li, Geyi Zhu, Peicheng Lu, Jinming Ma, Wenjia Tao, Jiajing Tang, Chuanhong Wang, Guomin Han

The paper introduces an annotation-independent machine learning framework to identify functional genes across species for shared phenotypes, demonstrating effectiveness in plant-mycorrhizal symbiosis, vertebrate skeletal development, and bacterial traits.

bioRxiv · Jul 4, 2025 · PreprintGenomics

Rapid identification of key genes for the rod-shaped morphology in bacteria using multi-species genomes

Qi Liu, Haida Liu, Chuangchuang Xu, Jianqiang Shi, Yanghe Xie, Shunli Hu, Guomin Han

The paper uses machine learning to predict bacterial shape from genomic data and identifies key genes involved in rod-shaped morphology through experimental validation.

bioRxiv · Jul 14, 2023 · PreprintGenetics