A new paradigm for biological sequence retrieval inspired by natural language processing and database research
Axel-Jan Rousseau, Sébastien Lemal, Yegor Korovin, Georgios Triantopoulos, Ingrid Brands, Maxim Biemans, Dirk Van Hyfte, Dirk Valkenborg
The paper introduces a new sequence retrieval method using pattern mining from cross-species omic data, showing it can retrieve homologous sequences with 50% identity without alignment.
bioRxiv · Nov 7, 2023 · PreprintBioinformatics